| Test case: | [spack] test build |
|---|
| Outcome: | Failed |
|---|
| Duration: | 0.0 sec |
|---|
| Failed | not ok 3 [spack] test build |
|---|
1..4
ok 1 [spack] check for RPM
duration_ms: 1.300
ok 2 [spack] add compiler
duration_ms: 2.982
not ok 3 [spack] test build
# (in test file spack, line 30)
# `spack install bats' failed with status 3
# ==> Bootstrapping clingo from pre-built binaries
# ==> Bootstrapping clingo from pre-built binaries
# ==> Bootstrapping clingo from sources
# ==> Installing zlib-1.2.13-wlhiqq4o2mnuccmdudxndqmd2r75qxc6
# ==> No binary for zlib-1.2.13-wlhiqq4o2mnuccmdudxndqmd2r75qxc6 found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/b3/b3a24de97a8fdbc835b9833169501030b8977031bcb54b3b3ac13740f846ab30.tar.gz
# ==> No patches needed for zlib
# ==> zlib: Executing phase: 'edit'
# ==> zlib: Executing phase: 'build'
# ==> zlib: Executing phase: 'install'
# ==> zlib: Successfully installed zlib-1.2.13-wlhiqq4o2mnuccmdudxndqmd2r75qxc6
# Fetch: 2.23s. Build: 1.57s. Total: 3.80s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/zlib-1.2.13-wlhiqq4o2mnuccmdudxndqmd2r75qxc6
# ==> Installing gnuconfig-2021-08-14-cbcw5tilwxazzr2laoqrbtwbwx7ydsir
# ==> No binary for gnuconfig-2021-08-14-cbcw5tilwxazzr2laoqrbtwbwx7ydsir found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/69/69b6d2868e70167ba1bdb9030b49beeb20f00b37e30825e83fd04291d96bc5f7.tar.gz
# ==> No patches needed for gnuconfig
# ==> gnuconfig: Executing phase: 'install'
# ==> gnuconfig: Successfully installed gnuconfig-2021-08-14-cbcw5tilwxazzr2laoqrbtwbwx7ydsir
# Fetch: 6.09s. Build: 0.10s. Total: 6.19s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/gnuconfig-2021-08-14-cbcw5tilwxazzr2laoqrbtwbwx7ydsir
# ==> Installing ca-certificates-mozilla-2022-10-11-zkm3s5n7chyqkxeinng4k25gckmj23pt
# ==> No binary for ca-certificates-mozilla-2022-10-11-zkm3s5n7chyqkxeinng4k25gckmj23pt found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/2c/2cff03f9efdaf52626bd1b451d700605dc1ea000c5da56bd0fc59f8f43071040
# ==> No patches needed for ca-certificates-mozilla
# ==> ca-certificates-mozilla: Executing phase: 'install'
# ==> ca-certificates-mozilla: Successfully installed ca-certificates-mozilla-2022-10-11-zkm3s5n7chyqkxeinng4k25gckmj23pt
# Fetch: 4.13s. Build: 0.05s. Total: 4.18s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/ca-certificates-mozilla-2022-10-11-zkm3s5n7chyqkxeinng4k25gckmj23pt
# ==> Installing re2c-2.2-lomyu62c54ium6zn3fvrobyu43z6l2x5
# ==> No binary for re2c-2.2-lomyu62c54ium6zn3fvrobyu43z6l2x5 found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/0f/0fc45e4130a8a555d68e230d1795de0216dfe99096b61b28e67c86dfd7d86bda.tar.xz
# ==> No patches needed for re2c
# ==> re2c: Executing phase: 'configure'
# ==> re2c: Executing phase: 'build'
# ==> re2c: Executing phase: 'install'
# ==> re2c: Successfully installed re2c-2.2-lomyu62c54ium6zn3fvrobyu43z6l2x5
# Fetch: 3.09s. Build: 14.23s. Total: 17.32s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/re2c-2.2-lomyu62c54ium6zn3fvrobyu43z6l2x5
# [+] /usr (external python-3.6-6x6x3xzlm36v5ag2juq2c2snvmpse4s3)
# ==> Installing libsigsegv-2.13-hztyp75j6lzq5xguc4njgymrgejsf2bj
# ==> No binary for libsigsegv-2.13-hztyp75j6lzq5xguc4njgymrgejsf2bj found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/be/be78ee4176b05f7c75ff03298d84874db90f4b6c9d5503f0da1226b3a3c48119.tar.gz
# ==> No patches needed for libsigsegv
# ==> libsigsegv: Executing phase: 'autoreconf'
# ==> libsigsegv: Executing phase: 'configure'
# ==> libsigsegv: Executing phase: 'build'
# ==> libsigsegv: Executing phase: 'install'
# ==> libsigsegv: Successfully installed libsigsegv-2.13-hztyp75j6lzq5xguc4njgymrgejsf2bj
# Fetch: 2.68s. Build: 6.74s. Total: 9.41s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/libsigsegv-2.13-hztyp75j6lzq5xguc4njgymrgejsf2bj
# ==> Installing libiconv-1.16-j64pyvwlhhiq55dmmy5scg3roc73tmwz
# ==> No binary for libiconv-1.16-j64pyvwlhhiq55dmmy5scg3roc73tmwz found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/e6/e6a1b1b589654277ee790cce3734f07876ac4ccfaecbee8afa0b649cf529cc04.tar.gz
# ==> No patches needed for libiconv
# ==> libiconv: Executing phase: 'autoreconf'
# ==> libiconv: Executing phase: 'configure'
# ==> libiconv: Executing phase: 'build'
# ==> libiconv: Executing phase: 'install'
# ==> libiconv: Successfully installed libiconv-1.16-j64pyvwlhhiq55dmmy5scg3roc73tmwz
# Fetch: 3.52s. Build: 27.08s. Total: 30.60s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/libiconv-1.16-j64pyvwlhhiq55dmmy5scg3roc73tmwz
# ==> Installing pkgconf-1.8.0-uzp5wq5f4tr57z74wc47bvs4gga7a3ci
# ==> No binary for pkgconf-1.8.0-uzp5wq5f4tr57z74wc47bvs4gga7a3ci found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/ef/ef9c7e61822b7cb8356e6e9e1dca58d9556f3200d78acab35e4347e9d4c2bbaf.tar.xz
# ==> No patches needed for pkgconf
# ==> pkgconf: Executing phase: 'autoreconf'
# ==> pkgconf: Executing phase: 'configure'
# ==> pkgconf: Executing phase: 'build'
# ==> pkgconf: Executing phase: 'install'
# ==> pkgconf: Successfully installed pkgconf-1.8.0-uzp5wq5f4tr57z74wc47bvs4gga7a3ci
# Fetch: 3.72s. Build: 5.79s. Total: 9.51s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/pkgconf-1.8.0-uzp5wq5f4tr57z74wc47bvs4gga7a3ci
# ==> Installing berkeley-db-18.1.40-dt3y7pjcofpwvdmn3vyoe7qydft2pirh
# ==> No binary for berkeley-db-18.1.40-dt3y7pjcofpwvdmn3vyoe7qydft2pirh found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/0c/0cecb2ef0c67b166de93732769abdeba0555086d51de1090df325e18ee8da9c8.tar.gz
# ==> Applied patch /opt/ohpc/admin/spack/0.19.2/var/spack/repos/builtin/packages/berkeley-db/drop-docs.patch
# ==> Applied patch /opt/ohpc/admin/spack/0.19.2/var/spack/repos/builtin/packages/berkeley-db/tls.patch
# ==> Ran patch() for berkeley-db
# ==> berkeley-db: Executing phase: 'autoreconf'
# ==> berkeley-db: Executing phase: 'configure'
# ==> berkeley-db: Executing phase: 'build'
# ==> berkeley-db: Executing phase: 'install'
# ==> berkeley-db: Successfully installed berkeley-db-18.1.40-dt3y7pjcofpwvdmn3vyoe7qydft2pirh
# Fetch: 7.96s. Build: 24.41s. Total: 32.37s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/berkeley-db-18.1.40-dt3y7pjcofpwvdmn3vyoe7qydft2pirh
# ==> Installing diffutils-3.8-nzc7ncqq2l7f4bkqq4nzaio6ubj4fkrt
# ==> No binary for diffutils-3.8-nzc7ncqq2l7f4bkqq4nzaio6ubj4fkrt found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/a6/a6bdd7d1b31266d11c4f4de6c1b748d4607ab0231af5188fc2533d0ae2438fec.tar.xz
# ==> No patches needed for diffutils
# ==> diffutils: Executing phase: 'autoreconf'
# ==> diffutils: Executing phase: 'configure'
# ==> diffutils: Executing phase: 'build'
# ==> diffutils: Executing phase: 'install'
# ==> diffutils: Successfully installed diffutils-3.8-nzc7ncqq2l7f4bkqq4nzaio6ubj4fkrt
# Fetch: 4.36s. Build: 33.08s. Total: 37.45s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/diffutils-3.8-nzc7ncqq2l7f4bkqq4nzaio6ubj4fkrt
# ==> Installing ncurses-6.3-iarvkbty6eqe6xdvtsutuzk4f372v76k
# ==> No binary for ncurses-6.3-iarvkbty6eqe6xdvtsutuzk4f372v76k found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/97/97fc51ac2b085d4cde31ef4d2c3122c21abc217e9090a43a30fc5ec21684e059.tar.gz
# ==> No patches needed for ncurses
# ==> ncurses: Executing phase: 'autoreconf'
# ==> ncurses: Executing phase: 'configure'
# ==> ncurses: Executing phase: 'build'
# ==> ncurses: Executing phase: 'install'
# ==> ncurses: Successfully installed ncurses-6.3-iarvkbty6eqe6xdvtsutuzk4f372v76k
# Fetch: 3.64s. Build: 56.79s. Total: 1m 0.43s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/ncurses-6.3-iarvkbty6eqe6xdvtsutuzk4f372v76k
# ==> Installing bzip2-1.0.8-puiizkmlrtagrhvrdssv3hajhz45s76n
# ==> No binary for bzip2-1.0.8-puiizkmlrtagrhvrdssv3hajhz45s76n found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/ab/ab5a03176ee106d3f0fa90e381da478ddae405918153cca248e682cd0c4a2269.tar.gz
# ==> Ran patch() for bzip2
# ==> bzip2: Executing phase: 'install'
# ==> bzip2: Successfully installed bzip2-1.0.8-puiizkmlrtagrhvrdssv3hajhz45s76n
# Fetch: 1.14s. Build: 2.88s. Total: 4.02s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/bzip2-1.0.8-puiizkmlrtagrhvrdssv3hajhz45s76n
# ==> Installing m4-1.4.19-ilazzu4duygwp7tilvsddiwc6ftkakdf
# ==> No binary for m4-1.4.19-ilazzu4duygwp7tilvsddiwc6ftkakdf found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/3b/3be4a26d825ffdfda52a56fc43246456989a3630093cced3fbddf4771ee58a70.tar.gz
# ==> Applied patch /opt/ohpc/admin/spack/0.19.2/var/spack/repos/builtin/packages/m4/checks-198.sysval.1.patch
# ==> Applied patch /opt/ohpc/admin/spack/0.19.2/var/spack/repos/builtin/packages/m4/checks-198.sysval.2.patch
# ==> Ran patch() for m4
# ==> m4: Executing phase: 'autoreconf'
# ==> m4: Executing phase: 'configure'
# ==> m4: Executing phase: 'build'
# ==> m4: Executing phase: 'install'
# ==> m4: Successfully installed m4-1.4.19-ilazzu4duygwp7tilvsddiwc6ftkakdf
# Fetch: 2.67s. Build: 39.32s. Total: 41.99s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/m4-1.4.19-ilazzu4duygwp7tilvsddiwc6ftkakdf
# ==> Installing readline-8.1.2-7ghchmymw62gh7yb4qkjqihy32bcwn3p
# ==> No binary for readline-8.1.2-7ghchmymw62gh7yb4qkjqihy32bcwn3p found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/75/7589a2381a8419e68654a47623ce7dfcb756815c8fee726b98f90bf668af7bc6.tar.gz
# ==> Ran patch() for readline
# ==> readline: Executing phase: 'autoreconf'
# ==> readline: Executing phase: 'configure'
# ==> readline: Executing phase: 'build'
# ==> readline: Executing phase: 'install'
# ==> readline: Successfully installed readline-8.1.2-7ghchmymw62gh7yb4qkjqihy32bcwn3p
# Fetch: 5.45s. Build: 9.16s. Total: 14.62s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/readline-8.1.2-7ghchmymw62gh7yb4qkjqihy32bcwn3p
# ==> Installing gdbm-1.23-3hq3pb3nf2ux7eqhzlqsze33b5zuspfk
# ==> No binary for gdbm-1.23-3hq3pb3nf2ux7eqhzlqsze33b5zuspfk found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/74/74b1081d21fff13ae4bd7c16e5d6e504a4c26f7cde1dca0d963a484174bbcacd.tar.gz
# ==> No patches needed for gdbm
# ==> gdbm: Executing phase: 'autoreconf'
# ==> gdbm: Executing phase: 'configure'
# ==> gdbm: Executing phase: 'build'
# ==> gdbm: Executing phase: 'install'
# ==> gdbm: Successfully installed gdbm-1.23-3hq3pb3nf2ux7eqhzlqsze33b5zuspfk
# Fetch: 5.27s. Build: 9.28s. Total: 14.54s.
# [+] /root/.spack/bootstrap/store/linux-opensuse_leap15-aarch64/gcc-7.5.0/gdbm-1.23-3hq3pb3nf2ux7eqhzlqsze33b5zuspfk
# ==> Installing perl-5.36.0-qddz7z6mqqqyu3jaodjnjj2hb674dt46
# ==> No binary for perl-5.36.0-qddz7z6mqqqyu3jaodjnjj2hb674dt46 found: installing from source
# ==> Fetching https://mirror.spack.io/_source-cache/archive/e2/e26085af8ac396f62add8a533c3a0ea8c8497d836f0689347ac5abd7b7a4e00a.tar.gz
# ==> Fetching http://www.cpan.org/src/5.0/perl-5.36.0.tar.gz
# ==> Error: timeout: timed out
#
# /opt/ohpc/admin/spack/0.19.2/lib/spack/spack/package_base.py:1456, in do_fetch:
# 1453
# 1454 self.stage.create()
# 1455 err_msg = None if not self.manual_download else self.download_instr
# >> 1456 start_time = time.time()
# 1457 self.stage.fetch(mirror_only, err_msg=err_msg)
# 1458 self._fetch_time = time.time() - start_time
# 1459
#
#
# ==> Warning: Skipping build of bison-3.8.2-xj3atx6xvye3fedh4q3be636sjtvek3x since perl-5.36.0-qddz7z6mqqqyu3jaodjnjj2hb674dt46 failed
# ==> Warning: Skipping build of clingo-bootstrap-spack-svatlzarg3wjkzoxwocr5po5d4u3q4vl since bison-3.8.2-xj3atx6xvye3fedh4q3be636sjtvek3x failed
# ==> Warning: Skipping build of openssl-1.1.1s-njbntxlbkuh5ebwhx3vhapir6jcalnmw since perl-5.36.0-qddz7z6mqqqyu3jaodjnjj2hb674dt46 failed
# ==> Warning: Skipping build of cmake-3.24.3-t54p7p6vp37v7qxlbjb4sufndie75ext since openssl-1.1.1s-njbntxlbkuh5ebwhx3vhapir6jcalnmw failed
# ==> Error: cannot bootstrap the "clingo" Python module from spec "clingo-bootstrap@spack+python %gcc target=aarch64" due to the following failures:
# github-actions-v0.4 raised RuntimeError: The binary index is empty
# github-actions-v0.3 raised RuntimeError: The binary index is empty
# spack-install raised InstallError: Terminating after first install failure: timeout: timed out
# Run `spack --debug ...` for more detailed errors
duration_ms: 592.252
ok 4 [spack] test module refresh
duration_ms: 1.872